OBCS tutorial

Introduction

The purpose of this tutorial is to introduce you to the OBCS (Open Boundaries) and PTRACERS (Passive Tracers) modules. It assumes that you're comfortable building and running the model, and using your chosen method of data visualization (gcmpy, ParaView, VisIt, etc.) It's recommended to run the other two tutorials first.

General Considerations

Remember that when using OBCS, opening or closing a boundary is a compile-time option which must be declared in OBCS_OPTIONS.h. In addition, every boundary needs a .bin file for each tracer diagnostic you're using (e.g. temperature, passive tracer). Failure to provide such a file will likely cause the model to break. Finally, with PTRACERS, the advection scheme for each tracer needs to be set manually in data.ptracers to match the one you're using, usually 33 or 77. Using differing advection schemes causes strange behavior and sometimes NaNs.

Case 1: Warm inflow

This tutorial uses a very simple setup, with an inflow in the north boundary and an outflow in the east boundary. The lake floor is sloped downwards in the direction of the outflow. Initial temperature is stratified between 10 and 20 °C, and the inflow temperature is 25 °C. The inflow is also configured to have some passive tracer coming in. Finally, wind is added in the direction of the outflow (the same script as in the SEAICE tutorial is used with only minor changes).

Take a look at the python scripts inflow_outflow.py and initial_tracers.py You'll need to run these (as well as the other python scripts in this folder) to generate the .bin files for the model to read.

Case 3: Adding SEAICE

Introduction

The purpose of this tutorial is to introduce you to the OBCS (Open Boundaries) and PTRACERS (Passive Tracers) modules. It assumes that you're comfortable building and running the model, and using your chosen method of data visualization (gcmpy, ParaView, VisIt, etc.) It's recommended to run the other two tutorials first.