info specific to winisk and kazan: Difference between revisions

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(Created page with 'Here is a sample makefile for use at winisk/kazan. It uses Intel's FORTRAN compiler and links with NetCDF, FFTW3 and the Intel MKL. <syntaxhighlight lang="make"> SRC = file1.…')
 
(Add administration, hardware, software sections --RBL)
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Here is a sample makefile for use at winisk/kazan. It uses Intel's FORTRAN compiler and links with NetCDF, FFTW3 and the Intel MKL.
Winisk and Kazan are old Itanium-based Linux servers.  Winisk has hardware problems and is no longer in production.
 
== Administration ==
* kazan.math is administered by MFCF
* no root or sudo access for users
* home directories NFS-mounted from hood
 
== Kazan Hardware ==
* SGI Altix 3700
* 64 ItaniumII single-core 1.6 GHz CPUs
* 128 GB RAM
 
== Software ==
* Novell SLES 11 SP 1
* SGI Foundation 2 SP1, ProPack 7 SP 1, SCSL 1.6.1.0
* Intel C/C++, Fortran, MKL, idb, TBB, IPP. version  11.1.064
* Optimized MPI:  /opt/sgi/mpt/mpt-2.01/doc/README.relnotes
* refer to "Manual process placement on multi-processor machines" for information about dealing with the NUMA architecture of this machine (and others)
 
== Makefile ==
 
Here is a sample makefile for use on winisk and kazan. It uses Intel's FORTRAN compiler and links with NetCDF, FFTW3 and the Intel MKL.


<syntaxhighlight lang="make">
<syntaxhighlight lang="make">

Revision as of 10:59, 23 March 2018

Winisk and Kazan are old Itanium-based Linux servers. Winisk has hardware problems and is no longer in production.

Administration

  • kazan.math is administered by MFCF
  • no root or sudo access for users
  • home directories NFS-mounted from hood

Kazan Hardware

  • SGI Altix 3700
  • 64 ItaniumII single-core 1.6 GHz CPUs
  • 128 GB RAM

Software

  • Novell SLES 11 SP 1
  • SGI Foundation 2 SP1, ProPack 7 SP 1, SCSL 1.6.1.0
  • Intel C/C++, Fortran, MKL, idb, TBB, IPP. version 11.1.064
  • Optimized MPI: /opt/sgi/mpt/mpt-2.01/doc/README.relnotes
  • refer to "Manual process placement on multi-processor machines" for information about dealing with the NUMA architecture of this machine (and others)

Makefile

Here is a sample makefile for use on winisk and kazan. It uses Intel's FORTRAN compiler and links with NetCDF, FFTW3 and the Intel MKL. 

SRC    = file1.f90 file2.f90 ...

OBJ     = $(SRC:.f90=.o)

FC     = ifort
INCLUDE = -I/usr/local/netcdf/include
FFLAGSR = -O3
FFLAGS = -check bounds -g -debug all -warn all
MATH   = -lm
FFT    = -lfftw3 -Wl,--start-group $(MKLPATH)/libmkl_intel_lp64.a $(MKLPATH)/libmkl_sequential.a $(MKLPATH)/libmkl_core.a -Wl,--end-group -lm
NETCDF = -L/usr/local/netcdf/lib -lnetcdf

all: job_name

%.o: %.f90
        $(FC) $(FFLAGS) -c $<

job_name: $(OBJ)
        $(FC) $(INCLUDE) $(FFLAGS) -o job.out $(OBJ) $(MATH) $(FFT) $(NETCDF)

clean :
        \rm *.o *.mod *~ *.out
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